BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F11SP1|AL427051
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1337 1783 0.0
3x_Contig1025 662 0.0
>3x_Contig1337
Length = 7771
Score = 1783 bits (896), Expect = 0.0
Identities = 921/931 (98%), Gaps = 1/931 (0%)
Strand = Plus / Minus
Query: 1 gatctgctaaggcaggtttgactttcccagtcggtagagttcacagattgttgagaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 gatctgctaaggcaggtttgactttcccagtcggtagagttcacagattgttgagaaagg 1479
Query: 61 gtaactacgctcaaagaatcggttctggtgctccagtctatttgactgccgttttggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 gtaactacgctcaaagaatcggttctggtgctccagtctatttgactgccgttttggaat 1419
Query: 121 atttggccgctgaaatcttggaattggccggtaacgctgctagagacaacaagaagacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 atttggccgctgaaatcttggaattggccggtaacgctgctagagacaacaagaagacca 1359
Query: 181 gaatcatcccaagacatttgcaattggctatcagaaacgatgacgaattgaacaaattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 gaatcatcccaagacatttgcaattggctatcagaaacgatgacgaattgaacaaattgt 1299
Query: 241 tgggtaacgtgaccatcgctcaaggtggtgtcttgccaaacattcaccaaaacttgttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 tgggtaacgtgaccatcgctcaaggtggtgtcttgccaaacattcaccaaaacttgttgc 1239
Query: 301 caaagaaatcttccaaggctaaggcttctcaagaattataataagcctgagcaaaggggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 caaagaaatcttccaaggctaaggcttctcaagaattataataagcctgagcaaaggggg 1179
Query: 361 gaaaaaaaagaatggaatgcatacaaattttattttaatatgaaaacaaaattcatcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 gaaaaaaaagaatggaatgcatacaaattttattttaatatgaaaacaaaattcatcggg 1119
Query: 421 tctgtcactaatatatctttcttatgtttattctgagttggcattggcatcattttaaac 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 tctggcactaatatatctttcttatgtttattctgagttggcattggcatcattttaaac 1059
Query: 481 acacaaattactttatcaaacaaggagaaatggggggattctctgtttcatctctttgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 acacaaattactttatcaaacaaggagaaatggggggattctctgtttcatctctttgta 999
Query: 541 tgggatagttattttttatttgtactatatttyaaatatatatatmmnctacttcatcct 600
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 998 tgggatagttattttttatttgtactatattttaaatatatatataaactacttcatcct 939
Query: 601 acgttatgaggtatatctttaatcgtcatgaatttcgggttagattactttctttcaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 acgttatgaggtatatctttaatcgtcatgaatttcgggttagattactttctttcaatg 879
Query: 661 actttcaattctgtctgtgttgttgattttgacacattattgtccttttcctgtctttta 720
|||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 878 actttcaattctgtctgtgttgttgattttgaaaaattaatgtccttttcctgtctttta 819
Query: 721 acattgaatattcccttgaatgtattttagattaatttggacaaagttgttttagatcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acattgaatattcccttgaatgtattttagattaatttggacaaagttgttttagatcaa 759
Query: 781 gaagagagtagaaaagaaaaattaattactattaacggtataactatttagtgttgatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gaagagagtagaaaagaaaaattaattactattaacggtataactatttagtgttgatat 699
Query: 841 gagtcttattagatttaaataaccttttkgaagaacgaacctttctcgttcttcttcttg 900
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 698 gagtcttattagatttaaataacctttt-gaagaacgaacctttctcgttcttcttcttg 640
Query: 901 cttttcgtcttctcattgatacgtggggkgt 931
|||||||||||||||||||||||||||| ||
Sbjct: 639 cttttcgtcttctcattgatacgtggggtgt 609
>3x_Contig1025
Length = 2581
Score = 662 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Plus
Query: 1 gatctgctaaggcaggtttgactttcccagtcggtagagttcacagattgttgagaaagg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 gatctgcaaaggcaggtttgactttcccagtcggtagagttcacagattgttgagaaagg 1985
Query: 61 gtaactacgctcaaagaatcggttctggtgctccagtctatttgactgccgttttggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 gtaactacgctcaaagaatcggttctggtgctccagtctatttgactgccgttttggaat 2045
Query: 121 atttggccgctgaaatcttggaattggccggtaacgctgctagagacaacaagaagacca 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 atttggctgctgaaatcttggaattggccggtaacgctgctagagacaacaagaagacca 2105
Query: 181 gaatcatcccaagacatttgcaattggctatcagaaacgatgacgaattgaacaaattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 gaatcatcccaagacatttgcaattggctatcagaaacgatgacgaattgaacaaattgt 2165
Query: 241 tgggtaacgtgaccatcgctcaaggtggtgtcttgccaaacattcaccaaaacttgttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 tgggtaacgtgaccatcgctcaaggtggtgtcttgccaaacattcaccaaaacttgttgc 2225
Query: 301 caaagaaatcttccaaggctaaggcttctcaagaattataa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 caaagaaatcttccaaggctaaggcttctcaagaattataa 2266
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,148
Number of Sequences: 1807
Number of extensions: 10148
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 2
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)